Publications and Preprints

* Indicates equal co-first author contributions.

Publications can also be found at https://scholar.google.com/citations?user=1ddfA3sAAAAJ.

• Ahanonu*, B., Crowther*, A., Kania, A., Rosa-Casillas, M., & Basbaum, A. I. (2024). Long-term optical imaging of the spinal cord in awake behaving mice. Nature Methods, 1-13. https://doi.org/10.1038/s41592-024-02476-3. Open access link: https://rdcu.be/dZWcr. Main PDF. Supplementary PDF.

• B. Ahanonu*, A. Crowther*, A. Kania, M. Rosa Casillas, A. Basbaum. Long-term optical imaging of the spinal cord in awake, behaving animals. (2023) bioRxiv. https://doi.org/10.1101/2023.05.22.541477.

• A. A. Legaria, B. A. Matikainen-Ankney, B. Yang, B. Ahanonu, J. A. Licholai, J. G. Parker & A. V. Kravitz. (2022). Fiber photometry in striatum reflects primarily nonsomatic changes in calcium. Nat Neurosci 25, 1124–1128 (2022). DOI link.

• Ahanonu B., Corder G. (2022) Recording Pain-Related Brain Activity in Behaving Animals Using Calcium Imaging and Miniature Microscopes. In: Seal R.P. (eds) Contemporary Approaches to the Study of Pain. Neuromethods, vol 178. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-2039-7_13. Main PDF.

• Farrell, J.S., Lovett-Barron, M., Klein, P.M., Sparks, F.T., Gschwind, T., Ortiz, A.L., Ahanonu, B., Bradbury, S., Terada, S., Oijala, M. and Hwaun, E., 2021. Supramammillary regulation of locomotion and hippocampal activity. Science, 374(6574), pp.1492-1496.

• Legaria, A.A., Yang, B., Ahanonu, B., Licholai, J.A., Parker, J.G. and Kravitz, A.V., 2021. Striatal fiber photometry reflects primarily non-somatic activity. bioRxiv.

• Inan, H., Schmuckermair, C., Tasci, T., Ahanonu, B.O., Hernandez, O., Lecoq, J., Dinç, F., Wagner, M.J., Erdogdu, M.A. and Schnitzer, M.J., 2021. Fast and statistically robust cell extraction from large-scale neural calcium imaging datasets. bioRxiv. https://doi.org/10.1101/2021.03.24.436279.

• T. Zhang*, O. Hernandez*, R. Chrapkiewicz, A. Shai, M.J. Wagner, Y. Zhang, C­H Wu, J.Z. Li, M. Inoue, Y. Gong, B. Ahanonu, H. Zeng, H. Bito, and M.J. Schnitzer. (2019) Kilohertz two-photon brain imaging in awake mice. https://doi.org/10.1038/s41592-019-0597-2 Nature Methods, 16, 1119–1122.

• H. Haberkern, M.A. Basnak, B. Ahanonu, D. Schauder, J.D. Cohen, M. Bolstad, C. Bruns, and V. Jayaraman. (2019). Visually guided behavior and optogenetically induced learning in head-fixed flies exploring a virtual landscape. Current Biology. https://doi.org/10.1016/j.cub.2019.04.033. Main PDF. Supplementary PDF.

• G. Corder*, B. Ahanonu*, B. F. Grewe, D. Wang, M. J. Schnitzer, and G. Scherrer (2019). An amygdalar neural ensemble that encodes the unpleasantness of pain. Science, 363, 276-281. http://science.sciencemag.org/content/363/6424/276. Main PDF. Supplementary PDF.

• H. Haberkern, M.A. Basnak, B. Ahanonu, D. Schauder, J.D. Cohen, M. Bolstad, C. Bruns, and V. Jayaraman (2018). On the adaptive behavior of head-fixed flies navigating in two-dimensional, visual virtual reality. bioRxiv preprint, 462028. https://doi.org/10.1101/462028. Main and Supplementary PDF

• J.G. Parker*, J.D. Marshall*, B. Ahanonu, Y.W. Wu, T.H. Kim, B.F. Grewe, Y. Zhang, J.Z. Li, J.B. Ding, M.D. Ehlers, and M.J. Schnitzer (2018). Diametric neural ensemble dynamics in parkinsonian and dyskinetic states. Nature, 557, 177–182. https://doi.org/10.1038/s41586-018-0090-6. Main PDF. Supplementary PDF

• Y. Li, A. Mathis, B.F. Grewe, J.A. Osterhout, B. Ahanonu, M.J. Schnitzer, V.N. Murthy, and C. Dulac (2017). Neuronal representation of social information in the medial amygdala of awake behaving mice. Cell, 171(5), 1176-1190. https://doi.org/10.1016/j.cell.2017.10.015. Main and Supplementary PDF.

• M.M. Dobbin, R. Madabhushi, L. Pan, Y. Chen, D. Kim, J. Gao, B. Ahanonu, P.C. Pao, Y. Qiu, Y. Zhao, and L.H. Tsai (2013). SIRT1 collaborates with ATM and HDAC1 to maintain genomic stability in neurons. Nature Neuroscience, 16(8), 1008-1015. https://doi.org/10.1038/nn.3460. Main PDF. Supplementary PDF.

• T. Dean, B. Ahanonu, M. Chowdhury, A. Datta, A. Esteva, D. Eth, N. Redmon, O. Rumyantsev, and Y. Tarter (2013). On the technology prospects and investment opportunities for scalable neuroscience. arXiv preprint arXiv:1307.7302. https://arxiv.org/abs/1307.7302. Main PDF.